Detailed information of PE_Scaf6124_3.0 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6124_3.0REGULATOR OF CHROMOSOME CONDENSATIONSuperscaffold132828407428382395-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF03256ANAPC10Anaphase-promoting complex, subunit 10 (APC10)FamilyInterproscan
PF11515Cul7Mouse development and cellular proliferation protein Cullin-7FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR000569DomainHECT domainInterproscan
IPR004939DomainAPC10/DOC domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR021097DomainCPH domainInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6124_3.0 global RNA-seq network
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