| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf604_6.8 | NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 | Superscaffold12 | 8879668 | 8918883 | + |
| CDS | |||||
| PE_Scaf604_6.8 | |||||
| Transcript |
| PE_Scaf604_6.8 |
| Protein |
| PE_Scaf604_6.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11707 | Npa1 | Ribosome 60S biogenesis N-terminal | Family | Interproscan |
| PF16201 | NopRA1 | Nucleolar pre-ribosomal-associated protein 1 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR021714 | Domain | Nucleolar pre-ribosomal-associated protein 1, N-terminal | Interproscan |
| IPR032436 | Domain | Nucleolar pre-ribosomal-associated protein 1, C-terminal domain | Interproscan |
| IPR039844 | Family | Nucleolar pre-ribosomal-associated protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13500 | NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000463 | Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000466 | Biological Process | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf604_6.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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