Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf5897_0.2 | PITUITARY HOMEOBOX HOMOLOG PTX1 | Superscaffold5 | 50304825 | 50316499 | + |
CDS | |||||
PE_Scaf5897_0.2 | |||||
Transcript |
PE_Scaf5897_0.2 |
Protein |
PE_Scaf5897_0.2 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | Homeobox |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00046 | Homeodomain | Homeodomain | Domain | Interproscan |
PF03826 | OAR | OAR motif | Motif | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001356 | Domain | Homeobox domain | Interproscan |
IPR003654 | Domain | OAR domain | Interproscan |
IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
IPR016233 | Family | Homeobox protein Pitx/unc30 | Interproscan |
IPR017970 | Conserved_site | Homeobox, conserved site | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR45882 | PITUITARY HOMEOBOX HOMOLOG PTX1 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
GO:0009653 | Biological Process | anatomical structure morphogenesis | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf5897_0.2 global RNA-seq network |