Detailed information of PE_Scaf5770_4.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf5770_4.4UV-STIMULATED SCAFFOLD PROTEIN ASuperscaffold485624548596191+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09740DUF2043Uncharacterized conserved protein (DUF2043)FamilyInterproscan
PF20867UVSSA_NUVSSA N-terminal domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR018610FamilyUV-stimulated scaffold protein AInterproscan
IPR049408RepeatUV-stimulated scaffold protein A, N-terminal alpha-solenoid repeatsInterproscan
IPR049431DomainUV-stimulated scaffold protein A, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR28670UV-STIMULATED SCAFFOLD PROTEIN AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0006283Biological Processtranscription-coupled nucleotide-excision repairInterproscan
GO:0009411Biological Processresponse to UVInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf5770_4.4 global RNA-seq network
TOP