Detailed information of PE_Scaf5553_0.9 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf5553_0.9HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130Superscaffold142335071423391666-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16014SAP130_CHistone deacetylase complex subunit SAP130 C-terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR024137FamilyHistone deacetylase complex subunit SAP130Interproscan
IPR031963DomainHistone deacetylase complex subunit SAP130, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13497HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070822Cellular ComponentSin3-type complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf5553_0.9 global RNA-seq network
TOP