Gene detail

Detailed information of PE_Scaf5323_6.9 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf5323_6.9	INHIBITOR OF APOPTOSIS	Superscaffold5	63243659	63248147	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf5323_6.9

ATGGATCCATACTTCAGTCGGCTGGTGAAAGGACCTCCGCACAGAGAAAATGAGGAGATGCGATATGAAGCCGTGCGTCTAAACACCTTCAAGAATTGGCCAAACTGGGCAGCTGCGTGGCCGACAGTGCTGGTCAAAGCAGGCTTCTATTACACTGGAACAGCAGACCAAGTGGCCTGTTTCTGCTGCAGCGGTCGACTGAAGAGTTGGGAAGCTGGAGACTCGCCTATGACCAAACACAAGTGTTTTTTTCCACAATGCAGATTTGTGACCGGACGGGATTCTACAAACATACCGCTGGAGGAGGCACCAGAAGTGTCACCTGGTGGTCAGGGCTGTCGTACCAACGAGGTTTGCGATCGTTATAGTAAACTACCGAGGCGTGTTACTATTAGACTTTGTCGGCACAATGGGCTACCATCATTGGACCGGTTGACACCAGCAGTCCGAAGTCGGCTACCACAGAGAGACCAACGTCTTAGTTTACAATATTCAGCAACGAAAGATGAGCCATCGATTAATTTACAAGGTGGCCTTAGTATGGCCACAGGCGGCGCCGCTGGTATGCTCTCATTGAATCTGGAACAGCTGCAGGCTATGAAGTTTGAGAGCAAGAGACTCGAGAGCTTCACAGACTGGCCGACTTCAGCCTACTTACGCCCAGAGCATCTAGCCAAAGCCGGTGTATACTACATCGGACTCGCAGACCGAGTAAAGTGCGCCTTCTGCAATGGAATCTTACGAAACTGGCTACCAGGAGATGATCCTATGGTGGCGCATCTTGAATATTTTCCGAAATGTCCATTCCTCGAAGACGCACGGGCAGCAGGAAATGTGTCCATCGAGGAAGAGAAAGTTAACAACCAGCAAGCGTTACAGGTGTGTTCAGTATCGCTGTCTGTTGAGCAATTGACCACACTAGCGCAGGCACGCACGTACGCACGAACGCACGAATCATCGCAGATACGCCCGCCCGCACGCATATTTTTGCGTATAGGTGCATTTTAAATTGATGGATTCGTTACTTCGCGGCGGTTTGCTTACGTCACAATACAAATTATGCGCGTAACCTCTGTCAAGTTTTGCCTCTGCCAACAATGTTGATAACGGTTAAATGTGTGAATTACTTTACTATCTCGGCATGACATATCTGATAGATCATCTGTTCCTGCAAACATTCGTCGAGCATTTAGACGGAATGTCTAAACGCTCGACGTGTTCGGTATCCATTTTTGATAGCTTAACGGACCTTTTGCTAGGCAACACGTGAAGGAAAGGTAAATTATACGAGTAGCGCTATTTAATAAATTATACATGAATACAATGGTTCTTGAACTGTGCGTAATTTCTGAAGTCTAATACGGGGGCGAGGAGGTTTAGAAACGCCTCACCCACTGACAAGTTAATTTGTTCAGTGTTTGAGTAAGTACGCAACAACTCACCGAGCGTGGAATGTATTCAGAATACTGTGGCCAACCCTTCACCAAGCTCCCACCTGGGAGTTGTACGAGAGGAACCCAGGACACGGGACTACTCCGGAGAGACGAGCCGTCTGTCGTCCTTCACGCGATGGCCCCAAAACTCAAACCAGTCTCCTGAAGGCCTAGCCCGGGCTGGATTCTACTACACCGGTATGGCTTCTTCCCTTTCATTCCCAGATCCCATCAAATTCTGACCACATGGCCTTAGTTTAGGGCCAGTTACAGTTGAAATCAATTGTATGTAAAGGTTCGTCATGAATTCATTTAGCCCATCTCGAATCGGATTTGTTGACGTTAACATCTGTGTACTCAGTGGAATAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGAGTGTGTATGTGTGTCTGTGTGTGTATGTGTATGTGTGTGTGTATGTGTCTGCGTGTGTGAGTGTGTGAGTGTGTGAGTGTGTGAGTGAGTGAGTGTGTGAGTGTATGAGTGTGTGAGTGAGTGAGTGTGTGAGTGAGTGAATGAGTGAGTGAGTGAGTGAGTGAGTGAACAAGTGTGTGAGCAAAATAACCGACTCTGCTCTTTTGAGCTGGTATCTTGCGACACTATCCTGTGGATCTGTGTCTGCGAATTTATGTTGTGATGTCAAATTGTGAATTGGGCCTCGTTGTTGTGAGTGTGTGTGATAGAACACCTATAATGAACATTGCAGTGTGTGTGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGTGTGCGATAGAACACCTATAATGAACATTGCAGTGAAGACGATAACTGTGAATCGACGTGCCGTGTCTATGACAGATGACATATTATATTACGTATTTGCAGGGATTGCTGACTCTGTCAAGTGTTTCTCCTGCAACGGAACTCTACGCAGTTGGGAAAGAGGAGACGACCCGTGGACCGAACACGCCCATTGGTTCCCCCGCTGCAAGTACGTCAGGACAGTGAAGGGAGAATCCTTCATCCGCTCCGTGCAAGTGGTCTACCCAGGACAGGTAGCTAATTGACATCATCACCTGTTGAGTCTGAAATACCGCGGTGCACTCTAATAATAACAGTGTTCACAACGAGGTTAAATGTCCTCCTCAGAAGTTAATGTGATGATTACAGATACCGGACAATCGTTTAATTGGATTTGAGTTATCTTGCTCACGCATCGAAGCTTGGGAAATTCCGTTCACTGCACTTTGCTTCAGTTCACTCAGGTGTATAATTCAGTATCTGTGGTTGATAAAGATGAACGAGTAGTCTTTGCATAGTAGTTGCATCGTGGCTGAATACGTGCTGATGGAGTCAAGTAGTTGTTTGAATCAAGACGTCTACCAAGGGATTACGGGTAAAGCACTTTGAATGATCCCGTGTGTATTAGATATCACGCAATGTACGACCTTACCTTTTCCTTCATAACTTGGACAAAACGGGATGCAAAATTCACGATTGCTTGAGTTCAATGTTGATATCAATTAGTTATTTAGTTTCATTTTAATAACTGTTGACACATAGCAAATGGAGATTAGCAAAGGTAATATTGAATAACATGCGAAGTTTTAATATAAATGATGCAGCTATTAATACTAATCCTTTGATATGTACTTAAATGTTGATTGTTCCATTTCGCATTTGTGTTAATAAAATGACGCAGAAATACACGAGTTGTAATTTTTGAAAGAGAACGAATTTGTACAAATCCAAAATCATATTATAAGCCGAATTGATAACAATATTGCATGTCAATTTTCTCTTATTACTAATTTGGATATGATATGATGTTGCAGAGTAATGTAGTGAGATCAACCAACACTTCCGCCAGCGTCACACAATCAGCCGATGCTGGTAGGTGTGCATATATCTACAAACTGACTTAGTAGTTACAGCATGAACACTTTTAAAATTAAAACTTACATATATGAATAAACCAAACAATCCCATGGATGACAATGTTGCTTTGCATTCCGTACAAGATCCCTGTCAAAACTCTGATACATTGACGCATTGAGTCAATCGTCGCTCCGCAATTATTAAACAAATAACCTGGCTCCATACGGGAAGATCGACACAGAAAATTAAACGACTTTTCTACTAACATATGTAATAGACAGGTGCAATAAGTCATGAAATGACGTAGCAACAAAACATAGGTCAGACCAAACCAATATCTACATGCATGCGTTCGTTCAAAAAACACACATTCCTGATGCTGCGTTCGATCTCCTATGAAAGATTTGACTAAGCCGAACCGCCTGCGTACACATATTAGCCGTTTTATAACTTACATGTACATTTGGGGAATGGGATTACAAGAACACATTACACCCGAATGGAGTGCAGAGCTGTAAACAACAGATCACATCAAACACTCGATAGGCCAATGGCTTCCTTCTCCACTCACAATCTGGAGTATAGTTTTGGATGACAATCTTACTAAATATTGCTAATCGTCTCACACTACACTGGTGTCTCTGCAAAATGTATTTCTGCAAATTAGTTAATATCGGAGATACAGTAAGCTCTGATCTTGGTTCGTCTCCATGACCGCTATAATATCAATCAAAGGAGTTTCGGTGATTCACGCAACCATCTGTACCTCTGCTGTAGGAGTACGAAGGTTTCCGGTGGAGCCACGGGCAATTCGTGCACGCATGGATACCAGCAGAATGCGCAGTGTCCTCGACATAGGCTTTTCACGAGATCTCTTATATAACGTGATTGAACAACGTTTGGCAACCGCCGGTGAGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00653	BIR	Inhibitor of Apoptosis domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001370	Repeat	BIR repeat	Interproscan
IPR050784	Family	Inhibitor of Apoptosis	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10044	INHIBITOR OF APOPTOSIS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031398	Biological Process	positive regulation of protein ubiquitination	Interproscan
GO:0043027	Molecular Function	cysteine-type endopeptidase inhibitor activity involved in apoptotic process	Interproscan
GO:0043066	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf5323_6.9 global RNA-seq network