Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf505_9.1 | NEP1/MRA1 | Superscaffold9 | 23062546 | 23080288 | + |
CDS | |||||
PE_Scaf505_9.1 | |||||
Transcript |
PE_Scaf505_9.1 |
Protein |
PE_Scaf505_9.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF03587 | EMG1 | EMG1/NEP1 methyltransferase | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR005304 | Family | Ribosomal biogenesis, methyltransferase, EMG1/NEP1 | Interproscan |
IPR029026 | Homologous_superfamily | tRNA (guanine-N1-)-methyltransferase, N-terminal | Interproscan |
IPR029028 | Homologous_superfamily | Alpha/beta knot methyltransferases | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12636 | NEP1/MRA1 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005730 | Cellular Component | nucleolus | Interproscan |
GO:0019843 | Molecular Function | rRNA binding | Interproscan |
GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
GO:0070037 | Molecular Function | rRNA (pseudouridine) methyltransferase activity | Interproscan |
GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf505_9.1 global RNA-seq network |