Detailed information of PE_Scaf505_9.1 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf505_9.1NEP1/MRA1Superscaffold92306254623080288+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03587EMG1EMG1/NEP1 methyltransferaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005304FamilyRibosomal biogenesis, methyltransferase, EMG1/NEP1Interproscan
IPR029026Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR029028Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12636NEP1/MRA1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0070037Molecular FunctionrRNA (pseudouridine) methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf505_9.1 global RNA-seq network
TOP