| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf4905_6.1 | AAA DOMAIN-CONTAINING | Superscaffold12 | 26645133 | 26671852 | + |
| CDS | |||||
| PE_Scaf4905_6.1 | |||||
| Transcript |
| PE_Scaf4905_6.1 |
| Protein |
| PE_Scaf4905_6.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF09336 | Vps4_C | Vps4 C terminal oligomerisation domain | Domain | Interproscan |
| PF17862 | AAA_lid_3 | AAA+ lid domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003959 | Domain | ATPase, AAA-type, core | Interproscan |
| IPR003960 | Conserved_site | ATPase, AAA-type, conserved site | Interproscan |
| IPR015415 | Domain | Spastin/Vps4, C-terminal | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR041569 | Domain | AAA ATPase, AAA+ lid domain | Interproscan |
| IPR050304 | Family | Microtubule-severing AAA ATPase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23074 | AAA DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0015630 | Cellular Component | microtubule cytoskeleton | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0051013 | Biological Process | microtubule severing | Interproscan |
| GO:0140603 | Molecular Function | obsolete ATP hydrolysis activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf4905_6.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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