Gene detail

Detailed information of PE_Scaf4756_22.10 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf4756_22.10	NADH-CYTOCHROME B5 REDUCTASE	Superscaffold7	30317031	30319551	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf4756_22.10

GTCGGGAGCAGTCACAATGGCACAAAGTCACATGAGTGGTGTGTCGGGAGCAGTCACAATGGCACAAAGTCACACGAGTGGTGAGTCGGGAGCAGTCACAATGGCACAAAGTCACATGAGTGGTGAGTCGGGAGCAGTCACACCTGCTATGAACACAAATGTTGCAATGTCGAAGGTCCGAGTTGTTTCTGACGCAGTCCTTCCAGCCAGGCCAGAAGCGCCTGCGAGCTCCGATTGTTGCGGCAATGGCTGCTCAGTGTGTGTGTTCGACATCTACGAGCAGGAACTTGTAGTCTGGAGGAAGGAATGTGAACAAATCAGGAGAGGAGAGCTTGTTGACAAAGCCAACACCCAGGTGATTTAACGAGACTGTATTAATTAGCAGAACAAATATAATTTGTTATAATAGATTCTGAACGACTATTCTGTTGCTTTACTAAACCAATCTGTTAATATTGTTGTCTTGTTCATTTTATGTGTTAGTTCAACTTAGTTGCTAGAATGAAATCATTGATGAGGGAGTATTAAATGAGTTTTTCAAATGAAGTTTTGGTGTAACGTGTTTGAATGCTGTTGCATTATGATGCAAAAACAAACCATAAAGTAAAAGTTTGGTAAGTCAGTAAGTATAATGTATAATTATTTTCACAACATTCATAGCTAATAATATTCCTTGGTTCTTTTTCTGTCTGCTTAATGACTTTGTGTGTCTCTATCACTCTAGTGTCCAACATTATGCCCAGAAGAATACCACACATTCAAGATTGTCAACATAACAAAAGAGACAGATACTTGTTTTAAGTACAAGTTTAGTCTGTCGAGCCAGCATTGCTTACAATACAATCCTGGGCAGCATCTCATTCTAAGGTAAACCCTTTAAAACACGCTGTCTGATCTTAGATTATTGAACACTCTTCAGGATAGTGAATAAGAATTGTATTGAATATAGTCTGATTGTTTCATTTGTGAAAATAAGTTATGTAGTATAAATCATATTCTATTTTTGACCACCCTTTTGTGTTTTACTATGATGGTTTTTGAAATTTGAATAATTCACATAAAATCGCATTTTTATGTATATTGAATGTTGAGCGTAGGGAGCTAATACATGGTAGATTGACTGGGACAGCCATAAATTCTTACTTCAGTTACTTATTACCCCTAGGTGGAAGTATATTAGTTTTGTTAATTATTTATGCTCTGTGACGATTTTAGCTGTACAATATTTTACTAACATGGCATTGATATAATTTTCGGAGATAGGTATGATAACAAATTATGGCCAGGCAGTTTACATTTTAGCCCAGAAATAAAAATGATCTGATGACAATGCCTACGTTTGTTCTGTTGTGCAGATGGAGATCTGTAGACAAACTTGTCACACGACAGTACACTATCATCAGTGAGCCAACCGCCACTGGCTATTTTGAAGTACTTATCAAAGTGAGAAAATGCACTAAAAAGTAAATAATAGAACATTCACAAATGTTGCACATCCATACTATGGTACTATAAGTTTACTAAATGTGACAATAGAAATTTGTATGACTTGTTTACTTTTTATTTACATAACACATTTTAAGTACAGTGACAAGTCTGTGTCATAACTGGAAGTTACTTGAGGGTGTACATTTTGTTTATAAAGTACATATTTAGGAATAATTTGACAACATATTTGCTTATTCTTGTAGCTGTATCCTGATGGTTGCATGTCGCAGTACATCCGTACTTGGAGAGTCGGTGTTGACATCGAGTGGAGGGGACCACTTGGTCACTTCACGTATACTCCAAATATGGTAAGAATCTCTATTGAAACAACTTGGTCACTTTACCTTTAAATATGGTAAGAAACACTTTAATTGAAAACTTTAAAAAAAAAGATTTTGTCTTCTGCCCAGCAAATGGGCTGTTTTATTGTCTTTACTTTGGCCTTCAAAATCACACCATTAAAATACATGTTGTTTTGCATTGCATATTCTGTATGTATATTTGTAGACAACATGTACCAGTATGCGATTAAAATCCTGCCAGAAAACAAAAAATCTGTGAGAATTTATATATTCTAAAGGTAATAAATGTAGTACCATTGGTGAGTTGAGAAGTGTTAAGTCTCCTGTGCCAGGAGATCTTCATATTTGCTCAGTTTTGTGTCTCATTCTATTTCTTTTACAAATAGTTTTTAACGATTTTGTTGCACTGTTGCAGCAGCCGTGGATGGTGTTGCTAGCTGCAGGTACAGGTCTAGCTCCGATGATCCACGTTGTACGGACCGTGTTGGACAATGACCAGGACGAGACGAGATTGCGACTGATATATGCCTCTCGGACATATGGTGACATTCTGTTGAAGACTCAGCTGGACACGTGGCAAGATTTCTGGAACTTCTCTGTGCTCTACGTCCTCTCTCAGGTATGTTTTTGTCTCAATCTTGTCTACGTCCTCTCTCAGGTACATTGTCATCACTGTCTTGTCTACGTCCTCTCTCAGGTACATTGTCATCACTGTCTTGTCTACGTCCTCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00970	FAD_binding_6	Oxidoreductase FAD-binding domain	Domain	Interproscan
PF09791	Oxidored-like	Oxidoreductase-like protein, N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001834	Family	NADH:cytochrome b5 reductase-like	Interproscan
IPR008333	Domain	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	Interproscan
IPR017927	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR019180	Domain	Oxidoreductase-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004128	Molecular Function	cytochrome-b5 reductase activity, acting on NAD(P)H	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf4756_22.10 global RNA-seq network