Detailed information of PE_Scaf4664_3.15 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf4664_3.15INTEGRIN ALPHASuperscaffold18032245480350912-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000413FamilyIntegrin alpha chainInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf4664_3.15 global RNA-seq network
TOP