Detailed information of PE_Scaf4654_3.0 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf4654_3.0RETROTRANSPOSONSuperscaffold46964176269644830+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf4654_3.0 global RNA-seq network
TOP