Detailed information of PE_Scaf4197_2.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf4197_2.4NF-KAPPA-B INHIBITOR ALPHASuperscaffold857845445802774+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00582UspUniversal stress protein familyDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR006015FamilyUniversal stress protein A familyInterproscan
IPR006016DomainUspAInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051070FamilyNF-kappa-B InhibitorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46680NF-KAPPA-B INHIBITOR ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007253Biological Processcytoplasmic sequestering of NF-kappaBInterproscan
GO:0051059Molecular FunctionNF-kappaB bindingInterproscan
GO:0071356Biological Processcellular response to tumor necrosis factorInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf4197_2.4 global RNA-seq network
TOP