Detailed information of PE_Scaf3887_0.1 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf3887_0.1CONNECTIVE TISSUE GROWTH FACTOR-RELATEDSuperscaffold104597361746000599-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00219IGFBPInsulin-like growth factor binding proteinDomainInterproscan
PF19035TSP1_CCNCCN3 Nov like TSP1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000867DomainInsulin-like growth factor-binding protein, IGFBPInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR017891Conserved_siteInsulin-like growth factor binding protein, N-terminal, Cys-rich conserved siteInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR043973DomainCCN, TSP1 domainInterproscan
IPR050941FamilyCellular Communication Network FactorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11348CONNECTIVE TISSUE GROWTH FACTOR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf3887_0.1 global RNA-seq network
TOP