Detailed information of PE_Scaf3868_5.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf3868_5.5RGPR-RELATEDSuperscaffold106107238461133265+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12931Sec16_CSec23-binding domain of Sec16DomainInterproscan
PF12932Sec16Vesicle coat trafficking protein Sec16 mid-regionDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR024298DomainAncestral coatomer element 1, Sec16/Sec31Interproscan
IPR024340DomainSec16, central conserved domainInterproscan
IPR024880FamilyCOPII coat assembly protein, Sec16Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13402RGPR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006914Biological ProcessautophagyInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0012507Cellular ComponentER to Golgi transport vesicle membraneInterproscan
GO:0048208Biological ProcessCOPII vesicle coatingInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0070973Biological Processprotein localization to endoplasmic reticulum exit siteInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf3868_5.5 global RNA-seq network
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