Detailed information of PE_Scaf3475_13.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf3475_13.3IP21249PSuperscaffold121002582310044903+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00782DSPcDual specificity phosphatase, catalytic domainDomainInterproscan
PF17284Spermine_synt_NSpermidine synthase tetramerisation domainDomainInterproscan
PF17950SpmSyn_NS-adenosylmethionine decarboxylase N -terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000340DomainDual specificity phosphatase, catalytic domainInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR020422DomainDual specificity protein phosphatase domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR035246DomainSpermidine synthase, tetramerisation domainInterproscan
IPR037163Homologous_superfamilySpermidine synthase, tetramerisation domain superfamilyInterproscan
IPR040900DomainSpermine synthase, N-terminalInterproscan
IPR052103FamilyDual Specificity Protein PhosphatasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45961IP21249PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf3475_13.3 global RNA-seq network
TOP