| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf3213_3.4 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 | Superscaffold10 | 55814163 | 55884427 | + |
| CDS | |||||
| PE_Scaf3213_3.4 | |||||
| Transcript |
| PE_Scaf3213_3.4 |
| Protein |
| PE_Scaf3213_3.4 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02207 | zf-UBR | Putative zinc finger in N-recognin (UBR box) | Family | Interproscan |
| PF19423 | E3_UBR4_N | E3 ubiquitin-protein ligase UBR4 N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR045189 | Family | E3 ubiquitin ligase UBR4-like | Interproscan |
| IPR045841 | Domain | E3 ubiquitin-protein ligase UBR4, N-terminal | Interproscan |
| IPR047509 | Domain | E3 ubiquitin-protein ligase UBR4-like, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21725 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf3213_3.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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