Detailed information of PE_Scaf3191_3.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf3191_3.8PROTEIN PHOSPHATASE RELATEDSuperscaffold61245944712472047+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF05495zf-CHYCHY zinc fingerDomainInterproscan
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF18044zf-CCCH_4CCCH-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR008913DomainZinc finger, CHY-typeInterproscan
IPR009145FamilyU2 auxiliary factor small subunitInterproscan
IPR036280Homologous_superfamilyMultiheme cytochrome superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR037274Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan
IPR041367DomainE3 ligase, CCCH-type zinc fingerInterproscan
IPR050974FamilyPlant Zinc finger CCCH domain-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12506PROTEIN PHOSPHATASE RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf3191_3.8 global RNA-seq network
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