Detailed information of PE_Scaf2696_17.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf2696_17.3NEPHRINSuperscaffold56117836261203924-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02494HYRHYR domainDomainInterproscan
PF05454DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan
PF08205C2-set_2CD80-like C2-set immunoglobulin domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003410DomainHYR domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008465DomainDystroglycan, C-terminalInterproscan
IPR011489DomainEMI domainInterproscan
IPR013162DomainCD80-like, immunoglobulin C2-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11640NEPHRINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf2696_17.3 global RNA-seq network
TOP