| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf2592_0.5 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 | Superscaffold8 | 42483287 | 42505973 | + |
| CDS | |||||
| PE_Scaf2592_0.5 | |||||
| Transcript |
| PE_Scaf2592_0.5 |
| Protein |
| PE_Scaf2592_0.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02145 | Rap_GAP | Rap/ran-GAP | Family | Interproscan |
| PF07521 | RMMBL | Zn-dependent metallo-hydrolase RNA specificity domain | Motif | Interproscan |
| PF13299 | CPSF100_C | Cleavage and polyadenylation factor 2 C-terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000331 | Domain | Rap/Ran-GAP domain | Interproscan |
| IPR011108 | Domain | Zn-dependent metallo-hydrolase, RNA specificity domain | Interproscan |
| IPR025069 | Domain | Cleavage and polyadenylation specificity factor 2, C-terminal | Interproscan |
| IPR027075 | Family | Cleavage and polyadenylation specificity factor subunit 2 | Interproscan |
| IPR035974 | Homologous_superfamily | Rap/Ran-GAP superfamily | Interproscan |
| IPR036866 | Homologous_superfamily | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45922 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005096 | Molecular Function | GTPase activator activity | Interproscan |
| GO:0005847 | Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | Interproscan |
| GO:0006378 | Biological Process | obsolete mRNA polyadenylation | Interproscan |
| GO:0006398 | Biological Process | mRNA 3'-end processing by stem-loop binding and cleavage | Interproscan |
| GO:0051056 | Biological Process | regulation of small GTPase mediated signal transduction | Interproscan |
| GO:0098789 | Biological Process | obsolete pre-mRNA cleavage required for polyadenylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf2592_0.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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