Detailed information of PE_Scaf2357_1.9 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf2357_1.9SORTILIN RELATEDSuperscaffold102417064624212056+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR006581DomainVPS10Interproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf2357_1.9 global RNA-seq network
TOP