Detailed information of PE_Scaf1994_1.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1994_1.3GLYCINE DEHYDROGENASE, DECARBOXYLATINGSuperscaffold23701986937058860+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01212Beta_elim_lyaseBeta-eliminating lyaseDomainInterproscan
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001597DomainAromatic amino acid beta-eliminating lyase/threonine aldolaseInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf1994_1.3 global RNA-seq network
TOP