| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf1546_1.5 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | Superscaffold5 | 15166075 | 15215617 | - |
| CDS | |||||
| PE_Scaf1546_1.5 | |||||
| Transcript |
| PE_Scaf1546_1.5 |
| Protein |
| PE_Scaf1546_1.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15785 | SMG1 | Serine/threonine-protein kinase smg-1 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR031559 | Family | Serine/threonine-protein kinase SMG1 | Interproscan |
| IPR050517 | Family | DNA Damage Response and Repair Kinase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11139 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006468 | Biological Process | protein phosphorylation | Interproscan |
| GO:0016310 | Biological Process | phosphorylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf1546_1.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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