Detailed information of PE_Scaf12379_6.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12379_6.4DNA REPAIR PROTEIN REV1Superscaffold75751693157533523+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00817IMSimpB/mucB/samB familyFamilyInterproscan
PF11799IMS_CimpB/mucB/samB family C-terminal domainDomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF21704POLH-Rev1_HhHDNApol eta/Rev1, HhH motifMotifInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001126DomainUmuC domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR012112FamilyDNA repair protein Rev1Interproscan
IPR017961DomainDNA polymerase, Y-family, little finger domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR036775Homologous_superfamilyDNA polymerase, Y-family, little finger domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR047346Conserved_siteDNA repair protein REV1, ubiquitin-binding motif 1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR45990DNA REPAIR PROTEIN REV1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0017125Molecular Functiondeoxycytidyl transferase activityInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan
GO:0070987Biological Processerror-free translesion synthesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12379_6.4 global RNA-seq network
TOP