Detailed information of PE_Scaf12359_1.10 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12359_1.10CNH DOMAIN CONTAININGSuperscaffold81713211517155616-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00780CNHCNH domainRepeatInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12359_1.10 global RNA-seq network
TOP