Detailed information of PE_Scaf12251_2.9 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12251_2.9TRANSLATION ELONGATION FACTOR-RELATEDSuperscaffold113404333534064630-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00679EFG_CElongation factor G C-terminusDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF03764EFG_IVElongation factor G, domain IVDomainInterproscan
PF14492EFG_IIIElongation Factor G, domain IIIDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000640DomainElongation factor EFG, domain V-likeInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR005517DomainTranslation elongation factor EFG/EF2, domain IVInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR035647Homologous_superfamilyEF-G domain III/V-likeInterproscan
IPR041095DomainElongation Factor G, domain IIInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42908TRANSLATION ELONGATION FACTOR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12251_2.9 global RNA-seq network
TOP