Detailed information of PE_Scaf12248_1.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12248_1.4GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASESuperscaffold91759007117593453-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00282Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002129FamilyPyridoxal phosphate-dependent decarboxylaseInterproscan
IPR010977FamilyAromatic-L-amino-acid decarboxylaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR021115Binding_sitePyridoxal-phosphate binding siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11999GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004058Molecular Functionaromatic-L-amino-acid decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0006584Biological Processcatecholamine metabolic processInterproscan
GO:0016830Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0016831Molecular Functioncarboxy-lyase activityInterproscan
GO:0019752Biological Processcarboxylic acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0042427Biological Processserotonin biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12248_1.4 global RNA-seq network
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