Detailed information of PE_Scaf12047_9.12 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12047_9.12DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11Superscaffold55650874656527661-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF04152Mre11_DNA_bindMre11 DNA-binding presumed domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003701FamilyDNA double-strand break repair protein Mre11Interproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR007281DomainMre11, DNA-bindingInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR038487Homologous_superfamilyMre11, capping domainInterproscan
IPR041796DomainMre11 nuclease, N-terminal metallophosphatase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000014Molecular Functionsingle-stranded DNA endodeoxyribonuclease activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0004520Molecular FunctionDNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0031573Biological Processmitotic intra-S DNA damage checkpoint signalingInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0042138Biological Processmeiotic DNA double-strand break formationInterproscan
GO:0097552Biological Processmitochondrial double-strand break repair via homologous recombinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12047_9.12 global RNA-seq network
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