Detailed information of PE_Scaf12024_8.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12024_8.460S RIBOSOMAL PROTEIN L7Superscaffold36643752166447619+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00327Ribosomal_L30Ribosomal protein L30p/L7eDomainInterproscan
PF08079Ribosomal_L30_NRibosomal L30 N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005998FamilyLarge ribosomal subunit protein uL30, eukaryoticInterproscan
IPR012988DomainLarge ribosomal subunit protein uL30, N-terminal, eukaryotesInterproscan
IPR016082DomainLarge ribosomal subunit protein uL30-like, ferredoxin-like fold domainInterproscan
IPR018038Conserved_siteLarge ribosomal subunit protein uL30, conserved siteInterproscan
IPR035808DomainLarge ribosomal subunit protein uL30, eukaryotic/archaealInterproscan
IPR036919Homologous_superfamilyLarge ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyInterproscan
IPR039699FamilyLarge ribosomal subunit protein uL30Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR1152460S RIBOSOMAL PROTEIN L7Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12024_8.4 global RNA-seq network
TOP