Detailed information of PE_Scaf1198_0.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1198_0.3UBIQUITIN-PROTEIN LIGASE E3CSuperscaffold91251211112539559+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00612IQIQ calmodulin-binding motifMotifInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1198_0.3 global RNA-seq network
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