Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf1198_0.3 | UBIQUITIN-PROTEIN LIGASE E3C | Superscaffold9 | 12512111 | 12539559 | + |
CDS | |||||
PE_Scaf1198_0.3 | |||||
Transcript |
PE_Scaf1198_0.3 |
Protein |
PE_Scaf1198_0.3 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00612 | IQ | IQ calmodulin-binding motif | Motif | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000048 | Binding_site | IQ motif, EF-hand binding site | Interproscan |
IPR044611 | Family | Ubiquitin-protein ligase E3A/B/C-like | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR45700 | UBIQUITIN-PROTEIN LIGASE E3C | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf1198_0.3 global RNA-seq network |