Detailed information of PE_Scaf11952_14.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11952_14.5GLUTAMATE SYNTHASE [NADPH] SMALL CHAINSuperscaffold125393353053989219+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01493GXGXGGXGXG motifFamilyInterproscan
PF01645Glu_synthaseConserved region in glutamate synthaseDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF14691Fer4_20Dihydroprymidine dehydrogenase domain II, 4Fe-4S clusterDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002489DomainGlutamate synthase, alpha subunit, C-terminalInterproscan
IPR002932DomainGlutamate synthase domainInterproscan
IPR006005FamilyGlutamate synthase, NADH/NADPH, small subunit 1Interproscan
IPR009051Homologous_superfamilyAlpha-helical ferredoxinInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR028261DomainDihydroprymidine dehydrogenase domain IIInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR036485Homologous_superfamilyGlutamate synthase, alpha subunit, C-terminal domain superfamilyInterproscan
IPR051394FamilyGlutamate SynthaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43100GLUTAMATE SYNTHASE [NADPH] SMALL CHAINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006537Biological Processglutamate biosynthetic processInterproscan
GO:0015930Molecular Functionglutamate synthase activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016638Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donorsInterproscan
GO:0016639Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptorInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11952_14.5 global RNA-seq network
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