Detailed information of PE_Scaf1189_0.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1189_0.8SORTING NEXIN 17 AND 27Superscaffold31038779610418287-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF18116SNX17_FERM_CSorting Nexin 17 FERM C-terminal domainDomainInterproscan
PF21271SNX17-31_F2_FERMSortin nexin 17/31, FERM domain, F2 lobeDomainInterproscan
PF21273SNX17-27-31_F1_FERMSortin nexin 17/27/31, FERM domain, F1 lobeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001683DomainPhox homologyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR028666DomainSorting nexin-17, FERM domain, N-terminal subdomainInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR037831FamilySNX17/27/31-likeInterproscan
IPR037836DomainSNX17, atypical FERM-like domainInterproscan
IPR040842DomainSorting nexin-17/31, FERM domainInterproscan
IPR048763DomainSortin nexin 17/31, FERM domain, F1 lobeInterproscan
IPR048767DomainSortin nexin 17/31, FERM domain, F2 lobeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12431SORTING NEXIN 17 AND 27Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:1990126Biological Processendocytic recyclingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1189_0.8 global RNA-seq network
TOP