Detailed information of PE_Scaf11853_1.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11853_1.8TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6Superscaffold75210898452128220-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02969TAFTATA box binding protein associated factor (TAF)DomainInterproscan
PF07571TAF6_CTAF6 C-terminal HEAT repeat domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR011442DomainTAF6, C-terminal HEAT repeat domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR037796FamilyTranscription initiation factor TFIID subunit 6Interproscan
IPR046344Homologous_superfamilyTAF6, C-terminal HEAT repeat domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0046695Cellular ComponentSLIK (SAGA-like) complexInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf11853_1.8 global RNA-seq network
TOP