Detailed information of PE_Scaf11853_1.7 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11853_1.7PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Superscaffold75214105152186674-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)DomainInterproscan
PF03483B3_4B3/4 domainDomainInterproscan
PF03484B5tRNA synthetase B5 domainDomainInterproscan
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan
PF18262PhetRS_B1Phe-tRNA synthetase beta subunit B1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004531FamilyPhenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic typeInterproscan
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR005147DomaintRNA synthetase, B5-domainInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR013078FamilyHistidine phosphatase superfamily, clade-1Interproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR029033Homologous_superfamilyHistidine phosphatase superfamilyInterproscan
IPR040659DomainPhenylalanine--tRNA ligase beta subunit, B1 domainInterproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan
IPR045060FamilyPhenylalanine-tRNA ligase, class IIc, beta subunitInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11853_1.7 global RNA-seq network
TOP