| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf11846_1.7 | SPLICING FACTOR 45 SPF45 | Superscaffold1 | 57056839 | 57076945 | - |
| CDS | |||||
| PE_Scaf11846_1.7 | |||||
| Transcript |
| PE_Scaf11846_1.7 |
| Protein |
| PE_Scaf11846_1.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01585 | G-patch | G-patch domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000467 | Domain | G-patch domain | Interproscan |
| IPR003954 | Domain | RNA recognition motif domain, eukaryote | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR034653 | Domain | SPF45, RNA recognition motif | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR040052 | Family | Splicing factor 45 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13288 | SPLICING FACTOR 45 SPF45 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000380 | Biological Process | alternative mRNA splicing, via spliceosome | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0071011 | Cellular Component | precatalytic spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf11846_1.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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