Detailed information of PE_Scaf11797_12.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11797_12.3NEL HOMOLOGSuperscaffold125210857852128900-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001007DomainVWFC domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051586FamilyProtein kinase C-binding NELLInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24042NEL HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11797_12.3 global RNA-seq network
TOP