Detailed information of PE_Scaf11756_4.12 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11756_4.12SUGAR HYDROLASE-RELATEDSuperscaffold42889943428915410-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00933Glyco_hydro_3Glycosyl hydrolase family 3 N terminal domainDomainInterproscan
PF14310Fn3-likeFibronectin type III-like domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001764DomainGlycoside hydrolase, family 3, N-terminalInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR026891DomainFibronectin type III-like domainInterproscan
IPR036881Homologous_superfamilyGlycoside hydrolase family 3 C-terminal domain superfamilyInterproscan
IPR036962Homologous_superfamilyGlycoside hydrolase, family 3, N-terminal domain superfamilyInterproscan
IPR044993FamilyBeta-D-xylosidaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42721SUGAR HYDROLASE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0009044Molecular Functionxylan 1,4-beta-xylosidase activityInterproscan
GO:0009505Cellular Componentplant-type cell wallInterproscan
GO:0031222Biological Processarabinan catabolic processInterproscan
GO:0045493Biological Processxylan catabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11756_4.12 global RNA-seq network
TOP