Detailed information of PE_Scaf11621_1.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11621_1.6DNA POLYMERASE CATALYTIC SUBUNITSuperscaffold66082800660859296-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan
PF14260zf-C4polC4-type zinc-finger of DNA polymerase deltaDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR025687DomainC4-type zinc-finger of DNA polymerase deltaInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050240FamilyDNA polymerase type-BInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10322DNA POLYMERASE CATALYTIC SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0043625Cellular Componentdelta DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11621_1.6 global RNA-seq network
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