Detailed information of PE_Scaf11599_5.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11599_5.23'-5' EXONUCLEASE ERI1-RELATEDSuperscaffold45131777951332842-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929RNase_TExonucleaseFamilyInterproscan
PF02037SAPSAP domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003034DomainSAP domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR047201DomainERI-1-like, DEDDh 3'-5' exonuclease domainInterproscan
IPR051274Family3'-5' ExoribonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR230443'-5' EXONUCLEASE ERI1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000467Biological Processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf11599_5.2 global RNA-seq network
TOP