| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf11592_3.5 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3 | Superscaffold12 | 39583285 | 39606984 | - |
| CDS | |||||
| PE_Scaf11592_3.5 | |||||
| Transcript |
| PE_Scaf11592_3.5 |
| Protein |
| PE_Scaf11592_3.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13532 | 2OG-FeII_Oxy_2 | 2OG-Fe(II) oxygenase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005123 | Domain | Oxoglutarate/iron-dependent dioxygenase | Interproscan |
| IPR027450 | Domain | Alpha-ketoglutarate-dependent dioxygenase AlkB-like | Interproscan |
| IPR032854 | Family | Alkylated DNA repair protein alkB homologue 3 | Interproscan |
| IPR037151 | Homologous_superfamily | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31212 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006307 | Biological Process | DNA alkylation repair | Interproscan |
| GO:0035552 | Biological Process | obsolete oxidative single-stranded DNA demethylation | Interproscan |
| GO:0051213 | Molecular Function | dioxygenase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf11592_3.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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