Detailed information of PE_Scaf11488_3.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11488_3.2CARBAMOYLTRANSFERASE FAMILY MEMBERSuperscaffold64154035741579219+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan
PF02142MGSMGS-like domainDomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF02787CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR005480DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR005483DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR006275FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR011607DomainMethylglyoxal synthase-like domainInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR036897Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR036914Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004088Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006541Biological Processglutamine metabolic processInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf11488_3.2 global RNA-seq network
TOP