Detailed information of PE_Scaf1142_1.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1142_1.4SEMAPHORINSuperscaffold31157373011600225-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01403SemaSema domainRepeatInterproscan
PF01437PSIPlexin repeatFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001627DomainSema domainInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016201DomainPSI domainInterproscan
IPR027231FamilySemaphorinInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0071526Biological Processsemaphorin-plexin signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1142_1.4 global RNA-seq network
TOP