Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf1140_0.6 | GTPASE ERA | Superscaffold9 | 17039770 | 17050051 | + |
CDS | |||||
PE_Scaf1140_0.6 | |||||
Transcript |
PE_Scaf1140_0.6 |
Protein |
PE_Scaf1140_0.6 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR005662 | Family | GTPase Era | Interproscan |
IPR006073 | Domain | GTP binding domain | Interproscan |
IPR009019 | Homologous_superfamily | K homology domain superfamily, prokaryotic type | Interproscan |
IPR015946 | Homologous_superfamily | K homology domain-like, alpha/beta | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR42698 | GTPASE ERA | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000028 | Biological Process | ribosomal small subunit assembly | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005525 | Molecular Function | GTP binding | Interproscan |
GO:0005759 | Cellular Component | mitochondrial matrix | Interproscan |
GO:0019843 | Molecular Function | rRNA binding | Interproscan |
GO:0043024 | Molecular Function | ribosomal small subunit binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf1140_0.6 global RNA-seq network |