Detailed information of PE_Scaf11275_8.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11275_8.4CXXC-TYPE ZINC FINGER PROTEIN 1Superscaffold14085876040885176-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF12269CpG_bind_CCpG binding protein C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR022056DomainCpG binding protein, C-terminalInterproscan
IPR037869FamilySpp1/CFP1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46174CXXC-TYPE ZINC FINGER PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11275_8.4 global RNA-seq network
TOP