Detailed information of PE_Scaf11275_5.14 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11275_5.14SUCCINYL-COA SYNTHETASE BETA CHAINSuperscaffold14099622941014800+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00549Ligase_CoACoA-ligaseDomainInterproscan
PF08442ATP-grasp_2ATP-grasp domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005809FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR013650DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR017866Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR034722FamilySuccinate--CoA ligase [GDP-forming] subunit beta, mitochondrialInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004776Molecular Functionsuccinate-CoA ligase (GDP-forming) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006104Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709Cellular Componentsuccinate-CoA ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11275_5.14 global RNA-seq network
TOP