Gene detail

Detailed information of PE_Scaf11256_2.7 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf11256_2.7	PROTEIN ARGININE N-METHYLTRANSFERASE 5	Superscaffold13	26274587	26276739	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf11256_2.7

GCAGGCTGCGGATCTGACAGAGACAATGGCTAAACATTACAACCAGCTGCAGGAATCAGGACTTGAGGATCGCGCCAAGACTCATATCTTCTACATGCGCAACTTCGACAATTGGATCAAGAGCATGACCATCAGTGGGTGTTTCTCTTCTCTCGCAAGTAGCTGAATGAAAAATGGTTTGCATCACATGAAGAATTTTAAATATTTAATTTAAAATTGTGTTTGGAGTAGTATTTCTGGGCACCACAATTTATGATGTGTGCCTTAACTTGTAGCCCATATAATTTTGGTACCAGTTGTATACTTAGAATAGATGAAACAGATGGAAATAGAAGGAAAACAAAAGTCTAGGCCAGGCTCACCCCGACTACAGGGGGAAAAGGAGAACAACAAGAAGATCAGTTCATAAAGTCCTAAAATACATTAAGCAATGTGTCGGGGTAACTTCATCGACACCACTTATTGCAAAGGGAATAAGTGATACAGTGGTGCCACACAGTAGGATTGAAGCACTTTGAGCAGTCCCAAACACTGGATACCATACTCTACAGGAACTTAACTCTATTTTGACATTAGTTATTGTTTTCCATTTAAGTACTCTTACCTCACGTGCAAGCTTACTTTATGTCCGTAGACTGGAGAACCTCAAATACGAAGCGTGGAGGGACCTTGTGACGGTCGTGTCATGAGACATGAGGACATGGGACCCCGGAGAAAGCAGACATCGTCGTGAGTGACCTGCTTGGTTCGTTCGGAGACAGCGAACTCTTCCCAGAATGCCTTGACGGTGCAGATCTCTTCAGTCTGTACCCATGAGTCTGTGCTTAATTATAATAAACCATTTCTATCTGGTATGTTTCAGGCACCATTTGAGACTCCACACGTCATCAAACTACACAACATGAATGTAGTCGACACAACCAAGCCTCTCTTTCACTTCCATCATCCTAACAGGGTCGAAGGTCAGTCATGAACATCTAATGATTTTCCATGTGGAGTGTGTTACCTGGATTCAGTCAGCGTCGCTCAGCGAGTCTGACACTGTATATTTTTCTTGCTGTACTTTATATATGCCTAAGATTTGTTTTATGAATGAAAGTCCAAAATTATTCACAAACCTGTGTATTAGCATTGGCTGTTTTAAAAGAAAAATGTACTGATTTGCACACGAATATGCATACCATAAACTGTGACGTGTCACTCGTACAAAATAGATAATCTGCTATAACTCGAGTGGGATTTTGTGATGTTACCCCCCCTGATTCTGCAACGGATTAAGGGGAAGAAGGAAATAGTGGTTGATGTATGTGAAGGAATACATTTTGGACAGTAATTATAACATGGCTGAATGCTTCCTGGAGAAGTTGGGGTTTGCCAGAATGACATGTAAACACTTTACATGGTCCTAAGGAGTGGATACCAGGCTATATAAGAACTTAATCATGTTAATCTTTATATAAATCAGACCAAAGCATCAATTTGATTCTGTCATGAAATTCATAACATTATAGTTTGTGTTCTGAATTCTTTGCTCTATGTCAATAGCTGGATATGTTTTTTGTAGATGCAACACCAGACACCAACCACTATAAAGTGCTAAATTTCAATGTACAGGAAAGTGTACTTCTGCACGGGTTTGCGGGATACTTTGAATGTGTCTTGTATGCTGTTGTCGCACTGAGTAAGTACATTTTAAATGTGAACTCTGTTTTTAGAAGTTGTCAGGAGAGATGCTTTGATGTTGGGATATAGAAATAAGACTTCATATGATATTGTTGGTGTGTGTCGTGTCAGAGAACAGAGTGCCTGTATGATGTTGTTGGTGTTAGATAACTGAGTGCGTGTATCCAAAGTTCATCCTGAATGCCTGTATCCATGGTTGATCCTGAGTGCGTATATCCAAGGTTGATCCTGAGTGCCTGTATCCCAAGTTAATCGTGAGTGCGAATCCAGGATTGATCCTAAGAACTCAGTGCTTGCATCCAGGGTTCATTCTGAGTACGTGTATCCAGGGTTGATCTTCAATGCTTGCCTCCAAAGTTGACCCTGAGTATGTGTATCCAGGGTTGATCCTGAGTGCTTGTATTCAAAGTTGATTCTGAGTACGTGTATCCATGGTTGATCCTGAGTGCTTGTATCCAGGGTTGATCCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17286	PRMT5_C	PRMT5 oligomerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR035248	Domain	PRMT5, oligomerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10738	PROTEIN ARGININE N-METHYLTRANSFERASE 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008469	Molecular Function	histone arginine N-methyltransferase activity	Interproscan
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0034969	Biological Process	obsolete histone arginine methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf11256_2.7 global RNA-seq network