| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf11244_0.6 | RIBONUCLEASE | Superscaffold13 | 36359298 | 36368981 | + |
| CDS | |||||
| PE_Scaf11244_0.6 | |||||
| Transcript |
| PE_Scaf11244_0.6 |
| Protein |
| PE_Scaf11244_0.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00773 | RNB | RNB domain | Domain | Interproscan |
| PF17215 | Rrp44_S1 | S1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001900 | Domain | Ribonuclease II/R | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR033770 | Domain | Exosome complex exonuclease RRP44, S1 domain | Interproscan |
| IPR050180 | Family | RNR Ribonuclease | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23355 | RIBONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000175 | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| GO:0000176 | Cellular Component | nuclear exosome (RNase complex) | Interproscan |
| GO:0000177 | Cellular Component | cytoplasmic exosome (RNase complex) | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004519 | Molecular Function | endonuclease activity | Interproscan |
| GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0016075 | Biological Process | rRNA catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf11244_0.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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