Detailed information of PE_Scaf11231_7.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11231_7.5OPTICINSuperscaffold94254123142567692-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052489FamilyLeucine-rich repeat and WD repeat-containing protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR24370OPTICINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005664Cellular Componentnuclear origin of replication recognition complexInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0071169Biological Processestablishment of protein localization to chromatinInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11231_7.5 global RNA-seq network
TOP