Detailed information of PE_Scaf11231_5.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11231_5.5ELONGATION FACTOR TU-RELATEDSuperscaffold94260897642630126-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0070125Biological Processmitochondrial translational elongationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11231_5.5 global RNA-seq network
TOP