Detailed information of PE_Scaf11212_1.1 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11212_1.1SELENOPROTEIN SSuperscaffold1071219347130810+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06936Selenoprotein_SSelenoprotein S (SelS)FamilyInterproscan
PF13747DUF4164Domain of unknown function (DUF4164)Coiled-coilInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009703FamilySelenoprotein SInterproscan
IPR025310FamilyProtein of unknown function DUF4164Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR28621SELENOPROTEIN SInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0030970Biological Processretrograde protein transport, ER to cytosolInterproscan
GO:0036502Cellular ComponentDerlin-1-VIMP complexInterproscan
GO:0036513Cellular ComponentDerlin-1 retrotranslocation complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11212_1.1 global RNA-seq network
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