| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf1119_20.3 | VACUOLAR SORTING PROTEIN 53 | Superscaffold1 | 10898605 | 10944381 | - |
| CDS | |||||
| PE_Scaf1119_20.3 | |||||
| Transcript |
| PE_Scaf1119_20.3 |
| Protein |
| PE_Scaf1119_20.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04100 | Vps53_N | Vps53, N-terminal | Repeat | Interproscan |
| PF16854 | VPS53_C | Vacuolar protein sorting-associated protein 53 C-terminus | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007234 | Domain | Vps53, N-terminal | Interproscan |
| IPR031745 | Domain | Vps53, C-terminal | Interproscan |
| IPR038260 | Homologous_superfamily | Vps53, C-terminal domain superfamily | Interproscan |
| IPR039766 | Family | Vacuolar protein sorting-associated protein 53 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12820 | VACUOLAR SORTING PROTEIN 53 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000938 | Cellular Component | GARP complex | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf1119_20.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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